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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912047.1_cds_XP_016462082.1_55345
CDS Infomation

[gene=LOC107785321] [db_xref=GeneID:107785321] [protein=light-mediated development protein DET1-like isoform X2] [protein_id=XP_016462082.1] [location=complement(join(17886..18025,18148..18247,21049..21144,21471..21635,21713..21793,22404..22460,22627..22695,26412..26549,27515..27743,27848..28054,28165..28275,29401..29456))] [gbkey=CDS]
Sequence

ATGTTACCGCCAGGCTTTTTGAGCGCCAGATTTGTACCCCTTCTCCTGGCACCAGTATTC
ATCGTGCCAGAAGATTTTATGAGAACATTGTACCAAGTTATACCGTATATGATGTTGAAT
GTCCCGACCATTCATTTCGCAAGTTCACGGATGATGGTCTATATCTTGAAGTTCGAGAGC
TTCTTCACGCAACTGTACAGTGTAACTCTTGCTTCTAGTGGGGAACTTATATGCAAAGAT
TTCTTTCTCTATATGGAGAGCAATCAATTTGGACTCTTTGCAACTTCAACTGCACAAATT
CATGATGCTCCTCCTACTGGAGGGGCAATTCAGGGTGTCCCTTCAGTTGAAAAAATAACT
TTTCACCTTCTGAGGTTGGAGGATGGAGCTATACTTGATGAGAGGGTTTTTCACAATGAT
TATGTTAATTTGGCACATAGTGTTGGTGCTTTCTTGTATGATGATTTGCTTGCTATAGTG
TCCCTTCGTTTTCAAAGAATACACATCCTTCAGATCAGAGATTCTGGAGATCTTGTTGAT
GTACGAGCAATTGGGGAATTCTGCCGTGAAGATGATGAACTTTTTCTCAATTCCAATTCC
CAGGTGCTTGTAAATCATGTTGGAAATGGTTTTCATCATGGTCTGCCTGATCCAGAGACT
TCTTTCCTGAGTGGTATAAAGCAGCGGCTGCTTTCATTTATATTTCGAGGTATATGGAAT
GAAGAAACTGACCAGACCATGCGAGTGCAGTGCCTGAAGAAGAAGTTTTACTTCCACTTT
CAAGATTACATTGACTTAATTATCTGGAAGGTACAATTCTTGGACCGACATCACCTATTG
ATCAAGTTTGGCAGTGTTGATGGTGGGGTATCTCGAAATGCTGACAGCCATCCTTCCTTT
TTTGCTGTTTATAATATGGAGACTACTGACATTCTTGCATTTTATCAGAACTCAGCCGAT
GAGCTCTATTTCTTGTTCGAGCTGTTCAGTGACCACTTTCATGTTTCATCCAGAAGTTCA
TTACATATGAACTTCATGTCCTCTCATTCAAACAACATCCACGCCCTCGAGCAACTAAGG
TGCACAAAGAATAAAGCAGCCAGTTTTTCTCAATTTGTTAAGAAGATGATGGCCTCCTTG
CCTTTTAGTTGTCAGTCTCAGAGTCCTTCCCCTTATTTTGACCAATCTCTCTTCAGATTT
GATGAAAAGCTTATTTCAGCGATTGACCGCCATAGACAGTCTACTGACCATCCAATCAAA
TTCATTTCAAGGAGACAACTTAATATCCTGAAATTCAAAATTAAGCCAGGACCCGAAGCC
GGAAGCACGGATGGGCGGACTAAGAAGATCTGTTCCTTCCTCTTCCACCCAATATTACCC
CTTGCAATTTCTGTTCAACAAACCTTGTTTCTGCAGTCATCAGTTGTAAATATCCATTTT
CGTCGGTAA

Peptide Sequence

PEP ID

XP_016462082.1
PEP Infomation

PREDICTED: light-mediated development protein DET1-like isoform X2 [Nicotiana tabacum]
Sequence

MLPPGFLSARFVPLLLAPVFIVPEDFMRTLYQVIPYMMLNVPTIHFASSRMMVYILKFES
FFTQLYSVTLASSGELICKDFFLYMESNQFGLFATSTAQIHDAPPTGGAIQGVPSVEKIT
FHLLRLEDGAILDERVFHNDYVNLAHSVGAFLYDDLLAIVSLRFQRIHILQIRDSGDLVD
VRAIGEFCREDDELFLNSNSQVLVNHVGNGFHHGLPDPETSFLSGIKQRLLSFIFRGIWN
EETDQTMRVQCLKKKFYFHFQDYIDLIIWKVQFLDRHHLLIKFGSVDGGVSRNADSHPSF
FAVYNMETTDILAFYQNSADELYFLFELFSDHFHVSSRSSLHMNFMSSHSNNIHALEQLR
CTKNKAASFSQFVKKMMASLPFSCQSQSPSPYFDQSLFRFDEKLISAIDRHRQSTDHPIK
FISRRQLNILKFKIKPGPEAGSTDGRTKKICSFLFHPILPLAISVQQTLFLQSSVVNIHF
RR

Transcript Sequence

Gene sequence data has not been registered.